Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 KRASP1-201ENST00000407852 552 ntBASIC17.43■□□□□ 0.38
USB1Q9BQ65 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 AC004264.1-201ENST00000608354 794 ntBASIC17.43■□□□□ 0.38
USB1Q9BQ65 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.43■□□□□ 0.38
USB1Q9BQ65 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
USB1Q9BQ65 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 AL353807.1-201ENST00000427475 662 ntBASIC17.42■□□□□ 0.38
USB1Q9BQ65 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.42■□□□□ 0.38
USB1Q9BQ65 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USB1Q9BQ65 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 KRT16P5-201ENST00000455284 522 ntBASIC17.41■□□□□ 0.38
USB1Q9BQ65 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
USB1Q9BQ65 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
USB1Q9BQ65 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USB1Q9BQ65 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
USB1Q9BQ65 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms