Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB40CQ96S21 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB40CQ96S21 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 KRT8P20-201ENST00000423953 1409 ntBASIC15.86■□□□□ 0.13
RAB40CQ96S21 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 MIR6084-201ENST00000622012 110 ntBASIC15.86■□□□□ 0.13
RAB40CQ96S21 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
RAB40CQ96S21 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB40CQ96S21 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 ZNRF2P3-201ENST00000424200 374 ntBASIC15.85■□□□□ 0.13
RAB40CQ96S21 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RAB40CQ96S21 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RAB40CQ96S21 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAB40CQ96S21 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.84■□□□□ 0.13
RAB40CQ96S21 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms