Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC092667.1-201ENST00000434301 2586 ntBASIC15.23■□□□□ 0.03
DUX3Q96PT4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 KRT17P2-201ENST00000300992 1314 ntBASIC15.22■□□□□ 0.03
DUX3Q96PT4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 ECEL1P3-201ENST00000427961 737 ntBASIC15.22■□□□□ 0.03
DUX3Q96PT4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
DUX3Q96PT4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
DUX3Q96PT4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 AC018553.1-201ENST00000616682 1458 ntBASIC15.21■□□□□ 0.03
DUX3Q96PT4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.21■□□□□ 0.03
DUX3Q96PT4 AL355075.4-201ENST00000554988 638 ntBASIC15.21■□□□□ 0.03
DUX3Q96PT4 MIR4785-201ENST00000585005 73 ntBASIC15.21■□□□□ 0.03
DUX3Q96PT4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 CD177P1-201ENST00000606252 935 ntBASIC15.21■□□□□ 0.03
DUX3Q96PT4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
DUX3Q96PT4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DUX3Q96PT4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
DUX3Q96PT4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AC020907.5-201ENST00000624372 1936 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AP002982.1-201ENST00000492365 877 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AC026471.5-201ENST00000615068 467 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 REXO1L12P-201ENST00000622156 912 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 AC073912.3-201ENST00000624414 853 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 AP006587.1-201ENST00000534129 1502 ntBASIC15.2■□□□□ 0.02
DUX3Q96PT4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
DUX3Q96PT4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.2■□□□□ 0.02
DUX3Q96PT4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms