Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.81■■□□□ 1.08
SCLT1Q96NL6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
SCLT1Q96NL6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 FAM197Y1-201ENST00000421178 764 ntBASIC21.79■■□□□ 1.08
SCLT1Q96NL6 AL355355.2-201ENST00000442321 338 ntBASIC21.79■■□□□ 1.08
SCLT1Q96NL6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 CD177P1-201ENST00000606252 935 ntBASIC21.79■■□□□ 1.08
SCLT1Q96NL6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCLT1Q96NL6 AC138932.1-201ENST00000534164 6830 ntBASIC21.79■■□□□ 1.08
SCLT1Q96NL6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 AC116351.2-201ENST00000606540 1585 ntBASIC21.78■■□□□ 1.08
SCLT1Q96NL6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 AC018553.1-201ENST00000616682 1458 ntBASIC21.78■■□□□ 1.08
SCLT1Q96NL6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 AC026471.5-201ENST00000615068 467 ntBASIC21.78■■□□□ 1.08
SCLT1Q96NL6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SCLT1Q96NL6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 PHGDH-210ENST00000641115 1638 ntBASIC21.77■■□□□ 1.08
SCLT1Q96NL6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 AC073195.1-201ENST00000607241 877 ntBASIC21.77■■□□□ 1.08
SCLT1Q96NL6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCLT1Q96NL6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SCLT1Q96NL6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.77■■□□□ 1.07
SCLT1Q96NL6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SCLT1Q96NL6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 BX088651.1-201ENST00000540551 451 ntBASIC21.76■■□□□ 1.07
SCLT1Q96NL6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.76■■□□□ 1.07
SCLT1Q96NL6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms