Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 ESRRAP1-201ENST00000400596 1257 ntBASIC15.73■□□□□ 0.11
RITA1Q96K30 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.73■□□□□ 0.11
RITA1Q96K30 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.73■□□□□ 0.11
RITA1Q96K30 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.73■□□□□ 0.11
RITA1Q96K30 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.73■□□□□ 0.11
RITA1Q96K30 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.73■□□□□ 0.11
RITA1Q96K30 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RITA1Q96K30 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RITA1Q96K30 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
RITA1Q96K30 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.72■□□□□ 0.11
RITA1Q96K30 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RITA1Q96K30 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RITA1Q96K30 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.72■□□□□ 0.11
RITA1Q96K30 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 CD99P1-205ENST00000527459 561 ntBASIC15.72■□□□□ 0.11
RITA1Q96K30 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
RITA1Q96K30 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 AL121829.2-201ENST00000620908 328 ntBASIC15.72■□□□□ 0.11
RITA1Q96K30 AL121906.2-201ENST00000621597 723 ntBASIC15.72■□□□□ 0.11
RITA1Q96K30 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RITA1Q96K30 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RITA1Q96K30 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RITA1Q96K30 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.71■□□□□ 0.11
RITA1Q96K30 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.71■□□□□ 0.11
RITA1Q96K30 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.71■□□□□ 0.11
RITA1Q96K30 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 AP006587.1-201ENST00000534129 1502 ntBASIC15.71■□□□□ 0.11
RITA1Q96K30 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RITA1Q96K30 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.71■□□□□ 0.11
RITA1Q96K30 Z82202.1-201ENST00000623446 1880 ntBASIC15.71■□□□□ 0.11
RITA1Q96K30 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.71■□□□□ 0.1
RITA1Q96K30 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RITA1Q96K30 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
RITA1Q96K30 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RITA1Q96K30 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.71■□□□□ 0.1
RITA1Q96K30 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RITA1Q96K30 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.7■□□□□ 0.1
RITA1Q96K30 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RITA1Q96K30 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RITA1Q96K30 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.7■□□□□ 0.1
RITA1Q96K30 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.7■□□□□ 0.1
RITA1Q96K30 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.7■□□□□ 0.1
RITA1Q96K30 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.7■□□□□ 0.1
RITA1Q96K30 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms