Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 AC007322.1-201ENST00000426983 750 ntBASIC18.64■□□□□ 0.57
ITCHQ96J02 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.64■□□□□ 0.57
ITCHQ96J02 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.64■□□□□ 0.57
ITCHQ96J02 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.64■□□□□ 0.57
ITCHQ96J02 BID-214ENST00000617586 542 ntTSL 5 BASIC18.64■□□□□ 0.57
ITCHQ96J02 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.64■□□□□ 0.57
ITCHQ96J02 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ITCHQ96J02 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
ITCHQ96J02 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ITCHQ96J02 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
ITCHQ96J02 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.63■□□□□ 0.57
ITCHQ96J02 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 AC138932.1-201ENST00000534164 6830 ntBASIC18.63■□□□□ 0.57
ITCHQ96J02 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 LINC01465-201ENST00000408887 1940 ntBASIC18.63■□□□□ 0.57
ITCHQ96J02 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
ITCHQ96J02 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.63■□□□□ 0.57
ITCHQ96J02 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.63■□□□□ 0.57
ITCHQ96J02 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.63■□□□□ 0.57
ITCHQ96J02 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ITCHQ96J02 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ITCHQ96J02 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.63■□□□□ 0.57
ITCHQ96J02 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ITCHQ96J02 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ITCHQ96J02 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ITCHQ96J02 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ITCHQ96J02 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.62■□□□□ 0.57
ITCHQ96J02 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ITCHQ96J02 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.61■□□□□ 0.57
ITCHQ96J02 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.61■□□□□ 0.57
ITCHQ96J02 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ITCHQ96J02 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms