Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 AC006333.2-201ENST00000607957 2099 ntBASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 FZD10-202ENST00000539839 3282 ntBASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.7■□□□□ 0.74
CHMP6Q96FZ7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 AL161938.1-201ENST00000569833 2180 ntBASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 AL358852.1-201ENST00000623174 1268 ntBASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHMP6Q96FZ7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 KRT16P2-201ENST00000414673 1423 ntBASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 NOC2LP2-201ENST00000407594 1944 ntBASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CHMP6Q96FZ7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CHMP6Q96FZ7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 NOC2LP1-202ENST00000452600 2235 ntBASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CHMP6Q96FZ7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms