Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRRC46Q96FV0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LRRC46Q96FV0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.61■□□□□ 0.41
LRRC46Q96FV0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 AC026471.5-201ENST00000615068 467 ntBASIC17.61■□□□□ 0.41
LRRC46Q96FV0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 AC133561.5-201ENST00000635547 218 ntBASIC17.61■□□□□ 0.41
LRRC46Q96FV0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 HTR7P1-201ENST00000538670 1336 ntBASIC17.61■□□□□ 0.41
LRRC46Q96FV0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LRRC46Q96FV0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LRRC46Q96FV0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms