Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 HYMAI.1-201ENST00000620949 238 ntBASIC23.03■■□□□ 1.28
CDCA5Q96FF9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CDCA5Q96FF9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 AC246785.2-201ENST00000432512 513 ntBASIC23.02■■□□□ 1.28
CDCA5Q96FF9 TSPY21P-201ENST00000433481 731 ntBASIC23.02■■□□□ 1.28
CDCA5Q96FF9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC23.02■■□□□ 1.28
CDCA5Q96FF9 TSPY23P-201ENST00000440136 739 ntBASIC23.02■■□□□ 1.28
CDCA5Q96FF9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CDCA5Q96FF9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CDCA5Q96FF9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23■■□□□ 1.27
CDCA5Q96FF9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23■■□□□ 1.27
CDCA5Q96FF9 KRT8P8-201ENST00000434750 1448 ntBASIC23■■□□□ 1.27
CDCA5Q96FF9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 FBXW4P1-201ENST00000426721 2239 ntBASIC23■■□□□ 1.27
CDCA5Q96FF9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23■■□□□ 1.27
CDCA5Q96FF9 AL160286.2-201ENST00000567150 934 ntBASIC23■■□□□ 1.27
CDCA5Q96FF9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23■■□□□ 1.27
CDCA5Q96FF9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
CDCA5Q96FF9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CDCA5Q96FF9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 CKBP1-201ENST00000565489 1086 ntBASIC22.99■■□□□ 1.27
CDCA5Q96FF9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CDCA5Q96FF9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CDCA5Q96FF9 LINC01311-201ENST00000565162 1445 ntBASIC22.98■■□□□ 1.27
CDCA5Q96FF9 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 AP000523.1-201ENST00000398242 1049 ntBASIC22.97■■□□□ 1.27
CDCA5Q96FF9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CDCA5Q96FF9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms