Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
ECHDC3Q96DC8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 AP002982.1-201ENST00000492365 877 ntBASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC3Q96DC8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 KSR1P1-201ENST00000446298 240 ntBASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 MIR4497-201ENST00000583208 89 ntBASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 AL445675.2-201ENST00000620291 557 ntBASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC3Q96DC8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC3Q96DC8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 SNORA78-201ENST00000459373 127 ntBASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 CD177P1-201ENST00000606252 935 ntBASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 HLA-A-209ENST00000638375 975 ntBASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ECHDC3Q96DC8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms