Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LRRC58Q96CX6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC58Q96CX6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 AL049812.1-201ENST00000432563 2267 ntBASIC18.6■□□□□ 0.57
LRRC58Q96CX6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC58Q96CX6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 AC006333.2-201ENST00000607957 2099 ntBASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LRRC58Q96CX6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LRRC58Q96CX6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRRC58Q96CX6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC58Q96CX6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
LRRC58Q96CX6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRRC58Q96CX6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 AC023632.3-201ENST00000521633 145 ntBASIC18.58■□□□□ 0.56
LRRC58Q96CX6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC58Q96CX6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms