Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
USP7Q93009 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
USP7Q93009 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 KRT17P2-201ENST00000300992 1314 ntBASIC19.34■□□□□ 0.69
USP7Q93009 TMEM179-206ENST00000616017 1645 ntBASIC19.34■□□□□ 0.69
USP7Q93009 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.34■□□□□ 0.69
USP7Q93009 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
USP7Q93009 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.34■□□□□ 0.69
USP7Q93009 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
USP7Q93009 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.34■□□□□ 0.69
USP7Q93009 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.34■□□□□ 0.69
USP7Q93009 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP7Q93009 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
USP7Q93009 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.33■□□□□ 0.69
USP7Q93009 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.33■□□□□ 0.69
USP7Q93009 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP7Q93009 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
USP7Q93009 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
USP7Q93009 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.33■□□□□ 0.68
USP7Q93009 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
USP7Q93009 BX088651.1-201ENST00000540551 451 ntBASIC19.33■□□□□ 0.68
USP7Q93009 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP7Q93009 LINC01023-201ENST00000606054 436 ntBASIC19.33■□□□□ 0.68
USP7Q93009 AP001412.1-201ENST00000608405 714 ntBASIC19.33■□□□□ 0.68
USP7Q93009 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
USP7Q93009 AL049637.2-201ENST00000641778 930 ntBASIC19.33■□□□□ 0.68
USP7Q93009 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.33■□□□□ 0.68
USP7Q93009 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.33■□□□□ 0.68
USP7Q93009 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP7Q93009 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
USP7Q93009 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.32■□□□□ 0.68
USP7Q93009 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.32■□□□□ 0.68
USP7Q93009 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.32■□□□□ 0.68
USP7Q93009 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.32■□□□□ 0.68
USP7Q93009 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.32■□□□□ 0.68
USP7Q93009 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
USP7Q93009 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.32■□□□□ 0.68
USP7Q93009 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP7Q93009 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
USP7Q93009 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
USP7Q93009 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.31■□□□□ 0.68
USP7Q93009 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.31■□□□□ 0.68
USP7Q93009 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.31■□□□□ 0.68
USP7Q93009 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.31■□□□□ 0.68
USP7Q93009 FAM210CP-201ENST00000445714 574 ntBASIC19.31■□□□□ 0.68
USP7Q93009 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
USP7Q93009 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP7Q93009 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP7Q93009 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms