Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS1Q92902 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS1Q92902 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HPS1Q92902 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS1Q92902 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS1Q92902 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.82■□□□□ 0.44
HPS1Q92902 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS1Q92902 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HPS1Q92902 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HPS1Q92902 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.81■□□□□ 0.44
HPS1Q92902 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.81■□□□□ 0.44
HPS1Q92902 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HPS1Q92902 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS1Q92902 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 POU5F1P4-201ENST00000413175 1085 ntBASIC17.81■□□□□ 0.44
HPS1Q92902 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS1Q92902 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.81■□□□□ 0.44
HPS1Q92902 UBE2DNL-204ENST00000602536 740 ntBASIC17.81■□□□□ 0.44
HPS1Q92902 MYCNOS-205ENST00000641950 531 ntBASIC17.81■□□□□ 0.44
HPS1Q92902 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HPS1Q92902 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS1Q92902 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS1Q92902 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.8■□□□□ 0.44
HPS1Q92902 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.8■□□□□ 0.44
HPS1Q92902 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HPS1Q92902 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.8■□□□□ 0.44
HPS1Q92902 DUX4L16-201ENST00000555130 1264 ntBASIC17.8■□□□□ 0.44
HPS1Q92902 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
HPS1Q92902 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HPS1Q92902 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HPS1Q92902 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HPS1Q92902 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.79■□□□□ 0.44
HPS1Q92902 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HPS1Q92902 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HPS1Q92902 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HPS1Q92902 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 AC079598.2-202ENST00000546624 1451 ntBASIC17.78■□□□□ 0.44
HPS1Q92902 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS1Q92902 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.78■□□□□ 0.44
HPS1Q92902 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.78■□□□□ 0.44
HPS1Q92902 AC005181.1-201ENST00000604782 1256 ntBASIC17.78■□□□□ 0.44
HPS1Q92902 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS1Q92902 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.78■□□□□ 0.44
HPS1Q92902 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.78■□□□□ 0.44
HPS1Q92902 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HPS1Q92902 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms