Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 AC016769.1-201ENST00000409132 1010 ntBASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 AC006015.1-201ENST00000429970 570 ntBASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 KRT18P5-201ENST00000436075 1291 ntBASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC44A1Q8WWI5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 KRT17P1-201ENST00000399211 1546 ntBASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 OR10C1-204ENST00000622521 1039 ntBASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC44A1Q8WWI5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC44A1Q8WWI5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 AC141586.3-201ENST00000562166 1838 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 TEX21P-204ENST00000641479 1693 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 AL162430.1-201ENST00000480705 870 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 BID-214ENST00000617586 542 ntTSL 5 BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 AC231657.2-201ENST00000624556 255 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 AL049812.1-201ENST00000432563 2267 ntBASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC44A1Q8WWI5 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms