Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.76■□□□□ 0.91
UBA3Q8TBC4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBA3Q8TBC4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 YBX1P10-201ENST00000444752 975 ntBASIC20.74■□□□□ 0.91
UBA3Q8TBC4 AC133681.1-201ENST00000465482 601 ntBASIC20.74■□□□□ 0.91
UBA3Q8TBC4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 AC110285.5-201ENST00000611501 352 ntBASIC20.74■□□□□ 0.91
UBA3Q8TBC4 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
UBA3Q8TBC4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBA3Q8TBC4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 TREX1-205ENST00000625293 1783 ntBASIC20.73■□□□□ 0.91
UBA3Q8TBC4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 GCSHP5-201ENST00000443090 522 ntBASIC20.73■□□□□ 0.91
UBA3Q8TBC4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
UBA3Q8TBC4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UBA3Q8TBC4 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms