Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SMARCC2Q8TAQ2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 AC142381.4-202ENST00000563973 229 ntBASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMARCC2Q8TAQ2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 Z82202.1-201ENST00000623446 1880 ntBASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SMARCC2Q8TAQ2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 TFP1-202ENST00000475455 1573 ntBASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 GCSHP5-201ENST00000443090 522 ntBASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 AL158047.1-201ENST00000445918 881 ntBASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
SMARCC2Q8TAQ2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 RPS2P52-201ENST00000469610 820 ntBASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 C1QBPP2-201ENST00000528754 825 ntBASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SMARCC2Q8TAQ2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 RN7SL471P-201ENST00000580476 299 ntBASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SMARCC2Q8TAQ2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms