Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CCDC92B-201ENST00000575506 885 ntBASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
RFWD2Q8NHY2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AC019069.1-201ENST00000610008 1333 ntBASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 YBX1P1-201ENST00000445822 960 ntBASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 KRT8P17-201ENST00000453110 1448 ntBASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AC087633.2-202ENST00000565166 1439 ntBASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AP001271.2-201ENST00000624018 1556 ntBASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.32■□□□□ 0.68
RFWD2Q8NHY2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 AC006333.2-201ENST00000607957 2099 ntBASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RFWD2Q8NHY2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD2Q8NHY2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms