Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SPTSSBQ8NFR3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 CICP6-201ENST00000457191 2729 ntBASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SPTSSBQ8NFR3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AC131274.2-201ENST00000580697 1507 ntBASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
SPTSSBQ8NFR3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms