Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL512408.1-201ENST00000569378 2000 ntBASIC24.18■■□□□ 1.46
RTL9Q8NET4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.18■■□□□ 1.46
RTL9Q8NET4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTL9Q8NET4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.17■■□□□ 1.46
RTL9Q8NET4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTL9Q8NET4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTL9Q8NET4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RTL9Q8NET4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTL9Q8NET4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC24.17■■□□□ 1.46
RTL9Q8NET4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AL137013.1-201ENST00000432946 1228 ntBASIC24.16■■□□□ 1.46
RTL9Q8NET4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AC104076.2-201ENST00000448912 469 ntBASIC24.16■■□□□ 1.46
RTL9Q8NET4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 GABARAPL3-202ENST00000624044 1851 ntBASIC24.16■■□□□ 1.46
RTL9Q8NET4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RTL9Q8NET4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC24.16■■□□□ 1.46
RTL9Q8NET4 DUX4L26-201ENST00000489078 1255 ntBASIC24.16■■□□□ 1.46
RTL9Q8NET4 AC010203.1-204ENST00000548782 407 ntBASIC24.16■■□□□ 1.46
RTL9Q8NET4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
RTL9Q8NET4 CRYGFP-201ENST00000418459 633 ntBASIC24.15■■□□□ 1.46
RTL9Q8NET4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 AC091390.4-202ENST00000476426 537 ntBASIC24.15■■□□□ 1.46
RTL9Q8NET4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.15■■□□□ 1.46
RTL9Q8NET4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
RTL9Q8NET4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC24.14■■□□□ 1.46
RTL9Q8NET4 AL137060.1-201ENST00000618151 2648 ntBASIC24.14■■□□□ 1.46
RTL9Q8NET4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.14■■□□□ 1.45
RTL9Q8NET4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.14■■□□□ 1.45
RTL9Q8NET4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTL9Q8NET4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC24.14■■□□□ 1.45
RTL9Q8NET4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.14■■□□□ 1.45
RTL9Q8NET4 FAM207BP-201ENST00000447172 505 ntBASIC24.14■■□□□ 1.45
RTL9Q8NET4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.14■■□□□ 1.45
RTL9Q8NET4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RTL9Q8NET4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTL9Q8NET4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTL9Q8NET4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RTL9Q8NET4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 NTF6B-201ENST00000591913 560 ntBASIC24.13■■□□□ 1.45
RTL9Q8NET4 FAM87A-204ENST00000613235 858 ntBASIC24.13■■□□□ 1.45
RTL9Q8NET4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.13■■□□□ 1.45
RTL9Q8NET4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 MFAP1P1-201ENST00000442257 1255 ntBASIC24.12■■□□□ 1.45
RTL9Q8NET4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.12■■□□□ 1.45
RTL9Q8NET4 AL691432.2-201ENST00000607222 2038 ntBASIC24.12■■□□□ 1.45
RTL9Q8NET4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTL9Q8NET4 AC006011.2-201ENST00000621313 1158 ntBASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms