Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.21■□□□□ 0.34
DNAAF1Q8NEP3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DNAAF1Q8NEP3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DNAAF1Q8NEP3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DNAAF1Q8NEP3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 AC016769.1-201ENST00000409132 1010 ntBASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DNAAF1Q8NEP3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 PTBP1P-201ENST00000554374 1601 ntBASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DNAAF1Q8NEP3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 AC006015.1-201ENST00000429970 570 ntBASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 DUX4L16-201ENST00000555130 1264 ntBASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 AC068338.2-201ENST00000563278 1430 ntBASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DNAAF1Q8NEP3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms