Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 FAM86EP-206ENST00000510506 987 ntBASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.69■■□□□ 1.06
PCSK9Q8NBP7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 KRT126P-201ENST00000549467 1181 ntBASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCSK9Q8NBP7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 AC012676.1-201ENST00000574705 1949 ntBASIC21.67■■□□□ 1.06
PCSK9Q8NBP7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 IER3-202ENST00000376377 1350 ntBASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 AC079834.2-201ENST00000609776 1949 ntBASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCSK9Q8NBP7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 KRT18P48-201ENST00000434763 852 ntBASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.65■■□□□ 1.06
PCSK9Q8NBP7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCSK9Q8NBP7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 AL671277.2-201ENST00000458060 996 ntBASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCSK9Q8NBP7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms