Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 ESRRAP1-201ENST00000400596 1257 ntBASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 AC092118.2-201ENST00000613495 667 ntBASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EFCAB3Q8N7B9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EFCAB3Q8N7B9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AC093503.3-201ENST00000624917 2352 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 GCSHP5-201ENST00000443090 522 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AC097658.1-201ENST00000475555 843 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 RPS2P4-201ENST00000476944 856 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AC142381.4-202ENST00000563973 229 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 AL390728.6-201ENST00000566446 1246 ntBASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
EFCAB3Q8N7B9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 AC098590.1-201ENST00000468126 897 ntBASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.35■□□□□ 0.69
EFCAB3Q8N7B9 RN7SL371P-201ENST00000578099 267 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms