Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC28.03■■■□□ 2.08
UBR1Q8IWV7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 AL160286.2-201ENST00000567150 934 ntBASIC28.02■■■□□ 2.08
UBR1Q8IWV7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
UBR1Q8IWV7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
UBR1Q8IWV7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
UBR1Q8IWV7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
UBR1Q8IWV7 KRT8P10-201ENST00000450021 1447 ntBASIC28.01■■■□□ 2.08
UBR1Q8IWV7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 LINC01311-201ENST00000565162 1445 ntBASIC28.01■■■□□ 2.07
UBR1Q8IWV7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC28.01■■■□□ 2.07
UBR1Q8IWV7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC28■■■□□ 2.07
UBR1Q8IWV7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28■■■□□ 2.07
UBR1Q8IWV7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
UBR1Q8IWV7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
UBR1Q8IWV7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC28■■■□□ 2.07
UBR1Q8IWV7 HBZP1-201ENST00000354915 429 ntBASIC28■■■□□ 2.07
UBR1Q8IWV7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC28■■■□□ 2.07
UBR1Q8IWV7 RN7SL510P-201ENST00000581311 263 ntBASIC28■■■□□ 2.07
UBR1Q8IWV7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC28■■■□□ 2.07
UBR1Q8IWV7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
UBR1Q8IWV7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28■■■□□ 2.07
UBR1Q8IWV7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
UBR1Q8IWV7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 AP000347.1-202ENST00000435868 847 ntBASIC27.98■■■□□ 2.07
UBR1Q8IWV7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27.98■■■□□ 2.07
UBR1Q8IWV7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 AL645929.1-201ENST00000420084 975 ntBASIC27.98■■■□□ 2.07
UBR1Q8IWV7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 GCSHP2-201ENST00000560971 527 ntBASIC27.98■■■□□ 2.07
UBR1Q8IWV7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
UBR1Q8IWV7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 FP700111.2-201ENST00000619190 1892 ntBASIC27.97■■■□□ 2.07
UBR1Q8IWV7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 AC111152.3-201ENST00000569699 673 ntBASIC27.97■■■□□ 2.07
UBR1Q8IWV7 AC023511.2-201ENST00000618803 211 ntBASIC27.97■■■□□ 2.07
UBR1Q8IWV7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.97■■■□□ 2.07
UBR1Q8IWV7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms