Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC060766.5-201ENST00000590539 871 ntBASIC18.34■□□□□ 0.53
CCDC71Q8IV32 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 Z82202.1-201ENST00000623446 1880 ntBASIC18.34■□□□□ 0.53
CCDC71Q8IV32 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.34■□□□□ 0.53
CCDC71Q8IV32 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC71Q8IV32 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC71Q8IV32 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 KRT18P68-201ENST00000392293 1000 ntBASIC18.33■□□□□ 0.52
CCDC71Q8IV32 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 AC008403.3-201ENST00000598924 454 ntBASIC18.33■□□□□ 0.52
CCDC71Q8IV32 HLA-B-256ENST00000639848 1089 ntBASIC18.33■□□□□ 0.52
CCDC71Q8IV32 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC71Q8IV32 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 AC007322.3-201ENST00000426526 701 ntBASIC18.32■□□□□ 0.52
CCDC71Q8IV32 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 AC116050.2-201ENST00000612102 1779 ntBASIC18.32■□□□□ 0.52
CCDC71Q8IV32 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC71Q8IV32 KRT8P36-201ENST00000489121 1440 ntBASIC18.32■□□□□ 0.52
CCDC71Q8IV32 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC71Q8IV32 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 AC092368.3-202ENST00000574180 1591 ntBASIC18.3■□□□□ 0.52
CCDC71Q8IV32 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC71Q8IV32 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms