Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 AL512625.2-201ENST00000417533 625 ntBASIC17.39■□□□□ 0.37
LRRC28Q86X40 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 TSPY6P-201ENST00000448518 926 ntBASIC17.39■□□□□ 0.37
LRRC28Q86X40 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC28Q86X40 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRC28Q86X40 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
LRRC28Q86X40 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LRRC28Q86X40 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 SLC29A4P1-201ENST00000398760 971 ntBASIC17.37■□□□□ 0.37
LRRC28Q86X40 CDV3P1-201ENST00000471403 739 ntBASIC17.37■□□□□ 0.37
LRRC28Q86X40 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 AC079598.2-202ENST00000546624 1451 ntBASIC17.37■□□□□ 0.37
LRRC28Q86X40 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRRC28Q86X40 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
LRRC28Q86X40 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 AL032819.2-201ENST00000624543 2162 ntBASIC17.36■□□□□ 0.37
LRRC28Q86X40 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 RARRES2P4-201ENST00000514074 484 ntBASIC17.36■□□□□ 0.37
LRRC28Q86X40 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC28Q86X40 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC28Q86X40 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms