Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 CR392000.1-201ENST00000624770 1228 ntBASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GDPD4Q6W3E5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 AL355355.2-201ENST00000442321 338 ntBASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 AC026471.5-201ENST00000615068 467 ntBASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 KRT16P1-201ENST00000399124 1418 ntBASIC19.68■□□□□ 0.74
GDPD4Q6W3E5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
GDPD4Q6W3E5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 AL445675.2-201ENST00000620291 557 ntBASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.66■□□□□ 0.74
GDPD4Q6W3E5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.65■□□□□ 0.74
GDPD4Q6W3E5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms