Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ARFGEF3Q5TH69 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 KRT18P16-201ENST00000510337 1294 ntBASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 AC020907.5-201ENST00000624372 1936 ntBASIC16.65■□□□□ 0.26
ARFGEF3Q5TH69 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ARFGEF3Q5TH69 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ARFGEF3Q5TH69 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 TUBB8P6-201ENST00000436895 1288 ntBASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 LINC01006-201ENST00000333319 2292 ntBASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 AL162377.1-201ENST00000618844 1793 ntBASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 CYP2D8P-201ENST00000433633 1490 ntBASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ARFGEF3Q5TH69 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 KRT8P8-201ENST00000434750 1448 ntBASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.63■□□□□ 0.25
ARFGEF3Q5TH69 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ARFGEF3Q5TH69 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms