Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL13A1Q5TAT6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
COL13A1Q5TAT6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
COL13A1Q5TAT6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 AC139530.1-201ENST00000575312 1977 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 SCARNA2-201ENST00000458748 420 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 AC074051.2-201ENST00000565115 352 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 AC011467.4-201ENST00000594891 528 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 AL356488.2-201ENST00000602755 427 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 ECEL1P1-201ENST00000373592 1742 ntBASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL13A1Q5TAT6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 AC139887.3-201ENST00000568585 713 ntBASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 AC099336.1-202ENST00000602961 463 ntBASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 KRT16P6-202ENST00000425692 1426 ntBASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 AC093525.10-201ENST00000625130 1569 ntBASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL13A1Q5TAT6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 AF186996.4-201ENST00000467186 377 ntBASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL13A1Q5TAT6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 KRT8P36-201ENST00000489121 1440 ntBASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 MIR770-201ENST00000390219 98 ntBASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 HLA-V-201ENST00000429037 534 ntBASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
COL13A1Q5TAT6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.16■■□□□ 1.14
COL13A1Q5TAT6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms