Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 YBX1P10-201ENST00000444752 975 ntBASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSL3PQ5NE16 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 AC069544.1-201ENST00000609399 999 ntBASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSL3PQ5NE16 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 ESRRAP1-201ENST00000400596 1257 ntBASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSL3PQ5NE16 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 MIR4651-201ENST00000582622 73 ntBASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSL3PQ5NE16 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 KRT18P16-201ENST00000510337 1294 ntBASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 MTDHP1-201ENST00000605323 784 ntBASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CTSL3PQ5NE16 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CTSL3PQ5NE16 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms