Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.64■□□□□ 0.57
TMEM35AQ53FP2 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35AQ53FP2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35AQ53FP2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 NBPF21P-201ENST00000425093 1451 ntBASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 KRT8P8-201ENST00000434750 1448 ntBASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 POU5F1P3-201ENST00000428824 1078 ntBASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 AC006058.3-201ENST00000606217 1069 ntBASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35AQ53FP2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM35AQ53FP2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms