Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CYP21A1P-202ENST00000354927 1481 ntBASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 LINC01465-201ENST00000408887 1940 ntBASIC17.46■□□□□ 0.39
CCDC58Q4VC31 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 AL139384.1-201ENST00000612143 3047 ntBASIC17.46■□□□□ 0.39
CCDC58Q4VC31 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC58Q4VC31 AC012313.1-201ENST00000593393 3059 ntBASIC17.46■□□□□ 0.38
CCDC58Q4VC31 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CCDC58Q4VC31 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC58Q4VC31 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 AL591742.1-201ENST00000604433 565 ntBASIC17.45■□□□□ 0.38
CCDC58Q4VC31 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 AC004854.2-201ENST00000608450 1441 ntBASIC17.45■□□□□ 0.38
CCDC58Q4VC31 AC093503.3-201ENST00000624917 2352 ntBASIC17.45■□□□□ 0.38
CCDC58Q4VC31 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC58Q4VC31 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 AC011270.2-201ENST00000624293 2550 ntBASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KRT19P1-201ENST00000405746 1186 ntBASIC17.44■□□□□ 0.38
CCDC58Q4VC31 AL162412.1-201ENST00000567129 965 ntBASIC17.44■□□□□ 0.38
CCDC58Q4VC31 AL031963.3-201ENST00000606441 850 ntBASIC17.44■□□□□ 0.38
CCDC58Q4VC31 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KRT8P20-201ENST00000423953 1409 ntBASIC17.44■□□□□ 0.38
CCDC58Q4VC31 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC58Q4VC31 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCDC58Q4VC31 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms