Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 AC020763.4-201ENST00000623414 4170 ntBASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCGF3Q3KNV8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 RNA5SP413-201ENST00000516373 109 ntBASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCGF3Q3KNV8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 C2orf69P4-201ENST00000565394 541 ntBASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 HLA-B-256ENST00000639848 1089 ntBASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 HCG11-201ENST00000411553 5696 ntBASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCGF3Q3KNV8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.28■□□□□ 0.36
PCGF3Q3KNV8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms