Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RFX4Q33E94 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.2■□□□□ 0.5
RFX4Q33E94 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 KRT18P61-201ENST00000585825 1298 ntBASIC18.2■□□□□ 0.5
RFX4Q33E94 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.2■□□□□ 0.5
RFX4Q33E94 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.2■□□□□ 0.5
RFX4Q33E94 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFX4Q33E94 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.2■□□□□ 0.5
RFX4Q33E94 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 ZNRF2P3-201ENST00000424200 374 ntBASIC18.19■□□□□ 0.5
RFX4Q33E94 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
RFX4Q33E94 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.19■□□□□ 0.5
RFX4Q33E94 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.19■□□□□ 0.5
RFX4Q33E94 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 MYCNOS-205ENST00000641950 531 ntBASIC18.19■□□□□ 0.5
RFX4Q33E94 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.19■□□□□ 0.5
RFX4Q33E94 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFX4Q33E94 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFX4Q33E94 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFX4Q33E94 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX4Q33E94 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 KRT16P6-202ENST00000425692 1426 ntBASIC18.18■□□□□ 0.5
RFX4Q33E94 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX4Q33E94 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RFX4Q33E94 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.18■□□□□ 0.5
RFX4Q33E94 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFX4Q33E94 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.18■□□□□ 0.5
RFX4Q33E94 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFX4Q33E94 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
RFX4Q33E94 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
RFX4Q33E94 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFX4Q33E94 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX4Q33E94 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX4Q33E94 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX4Q33E94 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RFX4Q33E94 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.17■□□□□ 0.5
RFX4Q33E94 AL356652.1-201ENST00000615962 565 ntBASIC18.17■□□□□ 0.5
RFX4Q33E94 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX4Q33E94 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 AL049812.1-201ENST00000432563 2267 ntBASIC18.17■□□□□ 0.5
RFX4Q33E94 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX4Q33E94 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX4Q33E94 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RFX4Q33E94 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX4Q33E94 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX4Q33E94 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms