Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 B3GAT3P1-201ENST00000471720 806 ntBASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 AC128688.1-201ENST00000487626 519 ntBASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 KRT18P56-201ENST00000507275 550 ntBASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 MIR2861-201ENST00000636310 90 ntBASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTC1Q2NKJ3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CTC1Q2NKJ3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 INGX-201ENST00000359239 846 ntBASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 CRYGFP-201ENST00000418459 633 ntBASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 AC117947.1-201ENST00000427448 529 ntBASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTC1Q2NKJ3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 TPM4P1-201ENST00000436100 807 ntBASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 C1QL1P1-201ENST00000568105 661 ntBASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.94■□□□□ 0.94
CTC1Q2NKJ3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 PTBP1P-201ENST00000554374 1601 ntBASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 HLA-G-202ENST00000376815 851 ntBASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 HLA-G-203ENST00000376818 1127 ntBASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 AC011506.1-201ENST00000474329 610 ntBASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTC1Q2NKJ3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms