Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 AL162377.1-201ENST00000618844 1793 ntBASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 AC091390.4-202ENST00000476426 537 ntBASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 DGCR10-201ENST00000609839 495 ntBASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SHROOM1Q2M3G4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 ARMC10P1-201ENST00000313754 855 ntBASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 AP000692.2-201ENST00000608391 879 ntBASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.91■■□□□ 1.26
SHROOM1Q2M3G4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 TSPY14P-201ENST00000303979 915 ntBASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 AL157384.1-201ENST00000445995 2473 ntBASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.9■■□□□ 1.26
SHROOM1Q2M3G4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.89■■□□□ 1.26
SHROOM1Q2M3G4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHROOM1Q2M3G4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHROOM1Q2M3G4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 KRT8P8-201ENST00000434750 1448 ntBASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
SHROOM1Q2M3G4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 AC004951.3-201ENST00000418645 1148 ntBASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 DUX4L26-201ENST00000489078 1255 ntBASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHROOM1Q2M3G4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHROOM1Q2M3G4 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms