Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.88■□□□□ 0.93
DSC1Q08554 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.88■□□□□ 0.93
DSC1Q08554 MFAP1P1-201ENST00000442257 1255 ntBASIC20.88■□□□□ 0.93
DSC1Q08554 ECEL1P2-202ENST00000465689 757 ntBASIC20.88■□□□□ 0.93
DSC1Q08554 KRT18P35-201ENST00000510488 1269 ntBASIC20.88■□□□□ 0.93
DSC1Q08554 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.88■□□□□ 0.93
DSC1Q08554 AL049597.2-201ENST00000565575 961 ntBASIC20.88■□□□□ 0.93
DSC1Q08554 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.88■□□□□ 0.93
DSC1Q08554 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.88■□□□□ 0.93
DSC1Q08554 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.88■□□□□ 0.93
DSC1Q08554 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.88■□□□□ 0.93
DSC1Q08554 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DSC1Q08554 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
DSC1Q08554 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.87■□□□□ 0.93
DSC1Q08554 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.87■□□□□ 0.93
DSC1Q08554 AL160286.2-201ENST00000567150 934 ntBASIC20.87■□□□□ 0.93
DSC1Q08554 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.87■□□□□ 0.93
DSC1Q08554 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.87■□□□□ 0.93
DSC1Q08554 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.87■□□□□ 0.93
DSC1Q08554 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.87■□□□□ 0.93
DSC1Q08554 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
DSC1Q08554 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
DSC1Q08554 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
DSC1Q08554 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 AC128688.1-201ENST00000487626 519 ntBASIC20.86■□□□□ 0.93
DSC1Q08554 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.86■□□□□ 0.93
DSC1Q08554 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.86■□□□□ 0.93
DSC1Q08554 AL590326.2-201ENST00000625139 305 ntBASIC20.86■□□□□ 0.93
DSC1Q08554 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
DSC1Q08554 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
DSC1Q08554 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
DSC1Q08554 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
DSC1Q08554 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
DSC1Q08554 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.85■□□□□ 0.93
DSC1Q08554 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.85■□□□□ 0.93
DSC1Q08554 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.85■□□□□ 0.93
DSC1Q08554 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.85■□□□□ 0.93
DSC1Q08554 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
DSC1Q08554 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
DSC1Q08554 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
DSC1Q08554 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.84■□□□□ 0.93
DSC1Q08554 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
DSC1Q08554 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.84■□□□□ 0.93
DSC1Q08554 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
DSC1Q08554 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
DSC1Q08554 AC104076.2-201ENST00000448912 469 ntBASIC20.84■□□□□ 0.93
DSC1Q08554 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms