Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEP78395 HLA-L-209ENST00000420110 1011 ntBASIC19.73■□□□□ 0.75
PRAMEP78395 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEP78395 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.73■□□□□ 0.75
PRAMEP78395 PNMA6B-201ENST00000538162 1200 ntBASIC19.73■□□□□ 0.75
PRAMEP78395 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.73■□□□□ 0.75
PRAMEP78395 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.73■□□□□ 0.75
PRAMEP78395 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.73■□□□□ 0.75
PRAMEP78395 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PRAMEP78395 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEP78395 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEP78395 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.73■□□□□ 0.75
PRAMEP78395 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEP78395 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PRAMEP78395 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PRAMEP78395 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEP78395 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEP78395 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.72■□□□□ 0.75
PRAMEP78395 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEP78395 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEP78395 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEP78395 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEP78395 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.72■□□□□ 0.75
PRAMEP78395 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.72■□□□□ 0.75
PRAMEP78395 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.72■□□□□ 0.75
PRAMEP78395 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.72■□□□□ 0.75
PRAMEP78395 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEP78395 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEP78395 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.72■□□□□ 0.75
PRAMEP78395 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PRAMEP78395 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PRAMEP78395 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEP78395 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.71■□□□□ 0.75
PRAMEP78395 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.71■□□□□ 0.75
PRAMEP78395 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.71■□□□□ 0.75
PRAMEP78395 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.71■□□□□ 0.75
PRAMEP78395 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PRAMEP78395 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.71■□□□□ 0.75
PRAMEP78395 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEP78395 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.74
PRAMEP78395 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEP78395 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEP78395 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEP78395 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEP78395 RPS2P52-201ENST00000469610 820 ntBASIC19.7■□□□□ 0.74
PRAMEP78395 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEP78395 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEP78395 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PRAMEP78395 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEP78395 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PRAMEP78395 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEP78395 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEP78395 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEP78395 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 AC124283.5-201ENST00000624661 1809 ntBASIC19.69■□□□□ 0.74
PRAMEP78395 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEP78395 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEP78395 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEP78395 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.69■□□□□ 0.74
PRAMEP78395 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEP78395 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEP78395 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEP78395 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.69■□□□□ 0.74
PRAMEP78395 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEP78395 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.69■□□□□ 0.74
PRAMEP78395 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PRAMEP78395 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEP78395 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PRAMEP78395 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.68■□□□□ 0.74
PRAMEP78395 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEP78395 ID1-201ENST00000376105 1233 ntBASIC19.68■□□□□ 0.74
PRAMEP78395 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms