Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RPS3AP61247 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
RPS3AP61247 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RPS3AP61247 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPS3AP61247 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 CD99P1-205ENST00000527459 561 ntBASIC18.3■□□□□ 0.52
RPS3AP61247 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.3■□□□□ 0.52
RPS3AP61247 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS3AP61247 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.3■□□□□ 0.52
RPS3AP61247 MYC-209ENST00000641252 345 ntBASIC18.3■□□□□ 0.52
RPS3AP61247 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
RPS3AP61247 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPS3AP61247 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.3■□□□□ 0.52
RPS3AP61247 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPS3AP61247 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RPS3AP61247 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS3AP61247 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS3AP61247 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
RPS3AP61247 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPS3AP61247 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.29■□□□□ 0.52
RPS3AP61247 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPS3AP61247 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RPS3AP61247 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPS3AP61247 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS3AP61247 AC007613.1-201ENST00000572811 2597 ntBASIC18.28■□□□□ 0.52
RPS3AP61247 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.28■□□□□ 0.52
RPS3AP61247 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS3AP61247 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.28■□□□□ 0.52
RPS3AP61247 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS3AP61247 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
RPS3AP61247 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.28■□□□□ 0.52
RPS3AP61247 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPS3AP61247 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RPS3AP61247 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RPS3AP61247 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS3AP61247 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS3AP61247 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS3AP61247 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS3AP61247 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RPS3AP61247 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPS3AP61247 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.27■□□□□ 0.52
RPS3AP61247 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.27■□□□□ 0.52
RPS3AP61247 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.27■□□□□ 0.52
RPS3AP61247 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS3AP61247 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.27■□□□□ 0.52
RPS3AP61247 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.27■□□□□ 0.52
RPS3AP61247 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms