Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.32■□□□□ 0.68
SRP54P61011 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.32■□□□□ 0.68
SRP54P61011 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.32■□□□□ 0.68
SRP54P61011 AC133561.5-201ENST00000635547 218 ntBASIC19.32■□□□□ 0.68
SRP54P61011 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SRP54P61011 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SRP54P61011 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.31■□□□□ 0.68
SRP54P61011 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.31■□□□□ 0.68
SRP54P61011 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SRP54P61011 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SRP54P61011 RBM17P1-201ENST00000453646 1190 ntBASIC19.31■□□□□ 0.68
SRP54P61011 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.31■□□□□ 0.68
SRP54P61011 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.31■□□□□ 0.68
SRP54P61011 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SRP54P61011 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.31■□□□□ 0.68
SRP54P61011 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.31■□□□□ 0.68
SRP54P61011 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.3■□□□□ 0.68
SRP54P61011 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRP54P61011 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SRP54P61011 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 AC092667.1-201ENST00000434301 2586 ntBASIC19.3■□□□□ 0.68
SRP54P61011 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 MMP23A-201ENST00000234610 1017 ntBASIC19.3■□□□□ 0.68
SRP54P61011 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.3■□□□□ 0.68
SRP54P61011 UNC93B2-201ENST00000285383 730 ntBASIC19.3■□□□□ 0.68
SRP54P61011 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.3■□□□□ 0.68
SRP54P61011 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.3■□□□□ 0.68
SRP54P61011 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.3■□□□□ 0.68
SRP54P61011 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.3■□□□□ 0.68
SRP54P61011 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.3■□□□□ 0.68
SRP54P61011 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.3■□□□□ 0.68
SRP54P61011 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SRP54P61011 AP005212.1-201ENST00000581547 1997 ntBASIC19.3■□□□□ 0.68
SRP54P61011 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SRP54P61011 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SRP54P61011 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.29■□□□□ 0.68
SRP54P61011 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
SRP54P61011 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 AC116562.2-201ENST00000507042 360 ntBASIC19.29■□□□□ 0.68
SRP54P61011 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.29■□□□□ 0.68
SRP54P61011 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
SRP54P61011 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.29■□□□□ 0.68
SRP54P61011 AL031985.4-201ENST00000642138 673 ntBASIC19.29■□□□□ 0.68
SRP54P61011 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SRP54P61011 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SRP54P61011 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.28■□□□□ 0.68
SRP54P61011 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.28■□□□□ 0.68
SRP54P61011 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.28■□□□□ 0.68
SRP54P61011 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SRP54P61011 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.28■□□□□ 0.68
SRP54P61011 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms