Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.21■□□□□ 0.83
EIF3EP60228 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
EIF3EP60228 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
EIF3EP60228 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3EP60228 AP000974.1-201ENST00000623909 2387 ntBASIC20.2■□□□□ 0.82
EIF3EP60228 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.2■□□□□ 0.82
EIF3EP60228 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3EP60228 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.2■□□□□ 0.82
EIF3EP60228 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.2■□□□□ 0.82
EIF3EP60228 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3EP60228 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EIF3EP60228 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.2■□□□□ 0.82
EIF3EP60228 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EIF3EP60228 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
EIF3EP60228 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.19■□□□□ 0.82
EIF3EP60228 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
EIF3EP60228 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
EIF3EP60228 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
EIF3EP60228 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EIF3EP60228 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.19■□□□□ 0.82
EIF3EP60228 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.19■□□□□ 0.82
EIF3EP60228 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.19■□□□□ 0.82
EIF3EP60228 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
EIF3EP60228 MIR4758-201ENST00000577688 71 ntBASIC20.19■□□□□ 0.82
EIF3EP60228 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
EIF3EP60228 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EIF3EP60228 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3EP60228 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3EP60228 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3EP60228 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.18■□□□□ 0.82
EIF3EP60228 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3EP60228 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.18■□□□□ 0.82
EIF3EP60228 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.18■□□□□ 0.82
EIF3EP60228 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.18■□□□□ 0.82
EIF3EP60228 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3EP60228 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.18■□□□□ 0.82
EIF3EP60228 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3EP60228 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3EP60228 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EIF3EP60228 AC124283.5-201ENST00000624661 1809 ntBASIC20.18■□□□□ 0.82
EIF3EP60228 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.18■□□□□ 0.82
EIF3EP60228 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
EIF3EP60228 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
EIF3EP60228 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.17■□□□□ 0.82
EIF3EP60228 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
EIF3EP60228 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.17■□□□□ 0.82
EIF3EP60228 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.17■□□□□ 0.82
EIF3EP60228 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.17■□□□□ 0.82
EIF3EP60228 AC097658.1-201ENST00000475555 843 ntBASIC20.17■□□□□ 0.82
EIF3EP60228 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.17■□□□□ 0.82
EIF3EP60228 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.17■□□□□ 0.82
EIF3EP60228 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.17■□□□□ 0.82
EIF3EP60228 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EIF3EP60228 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EIF3EP60228 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EIF3EP60228 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.16■□□□□ 0.82
EIF3EP60228 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.16■□□□□ 0.82
EIF3EP60228 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.16■□□□□ 0.82
EIF3EP60228 RPS2P52-201ENST00000469610 820 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms