Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
AP3S2P59780 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.83■□□□□ 0.28
AP3S2P59780 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 AP001271.2-201ENST00000624018 1556 ntBASIC16.83■□□□□ 0.28
AP3S2P59780 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.83■□□□□ 0.28
AP3S2P59780 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
AP3S2P59780 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP3S2P59780 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3S2P59780 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.82■□□□□ 0.28
AP3S2P59780 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 AC126544.1-201ENST00000580842 1059 ntBASIC16.82■□□□□ 0.28
AP3S2P59780 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.82■□□□□ 0.28
AP3S2P59780 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP3S2P59780 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 AC018470.1-201ENST00000624790 3129 ntBASIC16.81■□□□□ 0.28
AP3S2P59780 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.81■□□□□ 0.28
AP3S2P59780 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.81■□□□□ 0.28
AP3S2P59780 AC009299.2-201ENST00000482477 511 ntBASIC16.81■□□□□ 0.28
AP3S2P59780 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.81■□□□□ 0.28
AP3S2P59780 AL512631.2-201ENST00000604634 923 ntBASIC16.81■□□□□ 0.28
AP3S2P59780 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.81■□□□□ 0.28
AP3S2P59780 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.81■□□□□ 0.28
AP3S2P59780 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
AP3S2P59780 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP3S2P59780 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP3S2P59780 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
AP3S2P59780 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP3S2P59780 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP3S2P59780 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3S2P59780 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.8■□□□□ 0.28
AP3S2P59780 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP3S2P59780 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
AP3S2P59780 PCDHB18P-201ENST00000524813 2368 ntBASIC16.8■□□□□ 0.28
AP3S2P59780 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP3S2P59780 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.8■□□□□ 0.28
AP3S2P59780 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3S2P59780 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
AP3S2P59780 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3S2P59780 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
AP3S2P59780 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP3S2P59780 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.79■□□□□ 0.28
AP3S2P59780 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms