Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
WNT3AP56704 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
WNT3AP56704 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
WNT3AP56704 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.8■□□□□ 0.76
WNT3AP56704 AC233263.1-201ENST00000578059 224 ntBASIC19.8■□□□□ 0.76
WNT3AP56704 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
WNT3AP56704 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.8■□□□□ 0.76
WNT3AP56704 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
WNT3AP56704 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
WNT3AP56704 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.79■□□□□ 0.76
WNT3AP56704 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
WNT3AP56704 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 YBX1P10-201ENST00000444752 975 ntBASIC19.79■□□□□ 0.76
WNT3AP56704 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.79■□□□□ 0.76
WNT3AP56704 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.79■□□□□ 0.76
WNT3AP56704 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.79■□□□□ 0.76
WNT3AP56704 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.79■□□□□ 0.76
WNT3AP56704 MIR4651-201ENST00000582622 73 ntBASIC19.79■□□□□ 0.76
WNT3AP56704 AC069544.1-201ENST00000609399 999 ntBASIC19.79■□□□□ 0.76
WNT3AP56704 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 AC116562.4-201ENST00000641316 2276 ntBASIC19.79■□□□□ 0.76
WNT3AP56704 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3AP56704 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
WNT3AP56704 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
WNT3AP56704 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.78■□□□□ 0.76
WNT3AP56704 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.78■□□□□ 0.76
WNT3AP56704 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.78■□□□□ 0.76
WNT3AP56704 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
WNT3AP56704 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.78■□□□□ 0.76
WNT3AP56704 MTDHP1-201ENST00000605323 784 ntBASIC19.78■□□□□ 0.76
WNT3AP56704 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
WNT3AP56704 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.78■□□□□ 0.76
WNT3AP56704 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.78■□□□□ 0.76
WNT3AP56704 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3AP56704 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.77■□□□□ 0.76
WNT3AP56704 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
WNT3AP56704 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.77■□□□□ 0.76
WNT3AP56704 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.77■□□□□ 0.76
WNT3AP56704 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.77■□□□□ 0.76
WNT3AP56704 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.77■□□□□ 0.76
WNT3AP56704 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3AP56704 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
WNT3AP56704 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3AP56704 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3AP56704 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
WNT3AP56704 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3AP56704 AC093484.2-201ENST00000580996 2166 ntBASIC19.77■□□□□ 0.75
WNT3AP56704 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3AP56704 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3AP56704 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
WNT3AP56704 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3AP56704 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3AP56704 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.76■□□□□ 0.75
WNT3AP56704 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms