Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDH11P55287 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.91■□□□□ 0.46
CDH11P55287 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDH11P55287 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH11P55287 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
CDH11P55287 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.9■□□□□ 0.46
CDH11P55287 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH11P55287 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH11P55287 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 AC009237.14-201ENST00000609975 1594 ntBASIC17.9■□□□□ 0.46
CDH11P55287 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH11P55287 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDH11P55287 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH11P55287 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH11P55287 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.89■□□□□ 0.46
CDH11P55287 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH11P55287 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH11P55287 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH11P55287 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH11P55287 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH11P55287 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH11P55287 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.89■□□□□ 0.45
CDH11P55287 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH11P55287 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH11P55287 MIR4651-201ENST00000582622 73 ntBASIC17.89■□□□□ 0.45
CDH11P55287 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH11P55287 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDH11P55287 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH11P55287 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDH11P55287 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH11P55287 AC087633.2-202ENST00000565166 1439 ntBASIC17.89■□□□□ 0.45
CDH11P55287 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH11P55287 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH11P55287 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CDH11P55287 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.88■□□□□ 0.45
CDH11P55287 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.88■□□□□ 0.45
CDH11P55287 TMEM191A-211ENST00000637163 1067 ntBASIC17.88■□□□□ 0.45
CDH11P55287 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CDH11P55287 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CDH11P55287 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH11P55287 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH11P55287 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH11P55287 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH11P55287 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH11P55287 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms