Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCS2P54868 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.68■■□□□ 1.22
HMGCS2P54868 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HMGCS2P54868 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.67■■□□□ 1.22
HMGCS2P54868 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.67■■□□□ 1.22
HMGCS2P54868 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.67■■□□□ 1.22
HMGCS2P54868 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
HMGCS2P54868 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.67■■□□□ 1.22
HMGCS2P54868 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.66■■□□□ 1.22
HMGCS2P54868 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.66■■□□□ 1.22
HMGCS2P54868 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.66■■□□□ 1.22
HMGCS2P54868 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 LINC01238-205ENST00000567549 1107 ntBASIC22.66■■□□□ 1.22
HMGCS2P54868 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 AL358472.4-201ENST00000633140 710 ntBASIC22.66■■□□□ 1.22
HMGCS2P54868 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
HMGCS2P54868 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGCS2P54868 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC22.66■■□□□ 1.22
HMGCS2P54868 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HMGCS2P54868 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC22.66■■□□□ 1.22
HMGCS2P54868 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCS2P54868 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCS2P54868 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCS2P54868 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 RNF152P1-201ENST00000397754 604 ntBASIC22.65■■□□□ 1.22
HMGCS2P54868 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.65■■□□□ 1.22
HMGCS2P54868 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.65■■□□□ 1.22
HMGCS2P54868 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
HMGCS2P54868 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCS2P54868 AC092338.2-201ENST00000568827 1415 ntBASIC22.65■■□□□ 1.22
HMGCS2P54868 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
HMGCS2P54868 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCS2P54868 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCS2P54868 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
HMGCS2P54868 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.64■■□□□ 1.22
HMGCS2P54868 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCS2P54868 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.64■■□□□ 1.22
HMGCS2P54868 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
HMGCS2P54868 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC22.64■■□□□ 1.22
HMGCS2P54868 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
HMGCS2P54868 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.64■■□□□ 1.21
HMGCS2P54868 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
HMGCS2P54868 YBX1P2-201ENST00000489612 999 ntBASIC22.64■■□□□ 1.21
HMGCS2P54868 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.64■■□□□ 1.21
HMGCS2P54868 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.64■■□□□ 1.21
HMGCS2P54868 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 AC010653.2-201ENST00000623505 997 ntBASIC22.64■■□□□ 1.21
HMGCS2P54868 MYC-208ENST00000641036 567 ntBASIC22.64■■□□□ 1.21
HMGCS2P54868 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 LINC01465-201ENST00000408887 1940 ntBASIC22.64■■□□□ 1.21
HMGCS2P54868 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCS2P54868 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCS2P54868 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HMGCS2P54868 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCS2P54868 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCS2P54868 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
HMGCS2P54868 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 FAM8A6P-201ENST00000407496 1135 ntBASIC22.63■■□□□ 1.21
HMGCS2P54868 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCS2P54868 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.63■■□□□ 1.21
HMGCS2P54868 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCS2P54868 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCS2P54868 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCS2P54868 AL023803.3-201ENST00000615559 522 ntBASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms