Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
EPHB3P54753 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.5■□□□□ 0.87
EPHB3P54753 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
EPHB3P54753 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.49■□□□□ 0.87
EPHB3P54753 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
EPHB3P54753 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.49■□□□□ 0.87
EPHB3P54753 SLC25A1P4-201ENST00000567977 778 ntBASIC20.49■□□□□ 0.87
EPHB3P54753 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.49■□□□□ 0.87
EPHB3P54753 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
EPHB3P54753 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.49■□□□□ 0.87
EPHB3P54753 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EPHB3P54753 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.49■□□□□ 0.87
EPHB3P54753 AC073314.1-201ENST00000568729 2216 ntBASIC20.49■□□□□ 0.87
EPHB3P54753 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.48■□□□□ 0.87
EPHB3P54753 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
EPHB3P54753 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHB3P54753 AL137013.1-201ENST00000432946 1228 ntBASIC20.48■□□□□ 0.87
EPHB3P54753 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.48■□□□□ 0.87
EPHB3P54753 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHB3P54753 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
EPHB3P54753 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.48■□□□□ 0.87
EPHB3P54753 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHB3P54753 AP000692.2-201ENST00000608391 879 ntBASIC20.48■□□□□ 0.87
EPHB3P54753 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.48■□□□□ 0.87
EPHB3P54753 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EPHB3P54753 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
EPHB3P54753 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.48■□□□□ 0.87
EPHB3P54753 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EPHB3P54753 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.47■□□□□ 0.87
EPHB3P54753 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EPHB3P54753 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHB3P54753 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHB3P54753 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EPHB3P54753 SLC25A3P1-201ENST00000443844 931 ntBASIC20.47■□□□□ 0.87
EPHB3P54753 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EPHB3P54753 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
EPHB3P54753 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EPHB3P54753 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EPHB3P54753 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.47■□□□□ 0.87
EPHB3P54753 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EPHB3P54753 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHB3P54753 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
EPHB3P54753 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
EPHB3P54753 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHB3P54753 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHB3P54753 EGLN1P1-201ENST00000531623 762 ntBASIC20.46■□□□□ 0.87
EPHB3P54753 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
EPHB3P54753 AL137060.1-201ENST00000618151 2648 ntBASIC20.46■□□□□ 0.87
EPHB3P54753 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.46■□□□□ 0.87
EPHB3P54753 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EPHB3P54753 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
EPHB3P54753 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
EPHB3P54753 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
EPHB3P54753 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 TSPY14P-201ENST00000303979 915 ntBASIC20.45■□□□□ 0.86
EPHB3P54753 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EPHB3P54753 FAM207BP-201ENST00000447172 505 ntBASIC20.45■□□□□ 0.86
EPHB3P54753 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.45■□□□□ 0.86
EPHB3P54753 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 AL049597.2-201ENST00000565575 961 ntBASIC20.45■□□□□ 0.86
EPHB3P54753 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.45■□□□□ 0.86
EPHB3P54753 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHB3P54753 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
EPHB3P54753 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EPHB3P54753 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.86
EPHB3P54753 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms