Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.38■□□□□ 0.53
EFNA3P52797 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.37■□□□□ 0.53
EFNA3P52797 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.37■□□□□ 0.53
EFNA3P52797 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 NIFKP9-201ENST00000419265 221 ntBASIC18.37■□□□□ 0.53
EFNA3P52797 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.37■□□□□ 0.53
EFNA3P52797 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 AL355075.4-201ENST00000554988 638 ntBASIC18.37■□□□□ 0.53
EFNA3P52797 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.37■□□□□ 0.53
EFNA3P52797 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.37■□□□□ 0.53
EFNA3P52797 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 AP001271.2-201ENST00000624018 1556 ntBASIC18.37■□□□□ 0.53
EFNA3P52797 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EFNA3P52797 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EFNA3P52797 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNA3P52797 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.36■□□□□ 0.53
EFNA3P52797 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.36■□□□□ 0.53
EFNA3P52797 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.36■□□□□ 0.53
EFNA3P52797 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNA3P52797 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EFNA3P52797 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.36■□□□□ 0.53
EFNA3P52797 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
EFNA3P52797 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.36■□□□□ 0.53
EFNA3P52797 AC073195.1-201ENST00000607241 877 ntBASIC18.36■□□□□ 0.53
EFNA3P52797 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
EFNA3P52797 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
EFNA3P52797 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.35■□□□□ 0.53
EFNA3P52797 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.35■□□□□ 0.53
EFNA3P52797 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
EFNA3P52797 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.35■□□□□ 0.53
EFNA3P52797 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.35■□□□□ 0.53
EFNA3P52797 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 AC026471.5-201ENST00000615068 467 ntBASIC18.35■□□□□ 0.53
EFNA3P52797 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.35■□□□□ 0.53
EFNA3P52797 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.35■□□□□ 0.53
EFNA3P52797 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EFNA3P52797 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EFNA3P52797 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
EFNA3P52797 AC009237.14-201ENST00000609975 1594 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 PCDHAC2-203ENST00000615316 3011 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNA3P52797 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EFNA3P52797 AL353807.1-201ENST00000427475 662 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 AP002982.1-201ENST00000492365 877 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.34■□□□□ 0.53
EFNA3P52797 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.34■□□□□ 0.53
EFNA3P52797 AP001412.1-201ENST00000608405 714 ntBASIC18.34■□□□□ 0.53
EFNA3P52797 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EFNA3P52797 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.34■□□□□ 0.53
EFNA3P52797 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.34■□□□□ 0.53
EFNA3P52797 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms