Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CLCN4P51793 FAM207BP-201ENST00000447172 505 ntBASIC20.64■□□□□ 0.89
CLCN4P51793 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 AC063952.2-201ENST00000498792 1227 ntBASIC20.64■□□□□ 0.89
CLCN4P51793 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.64■□□□□ 0.89
CLCN4P51793 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.64■□□□□ 0.89
CLCN4P51793 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CLCN4P51793 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CLCN4P51793 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.64■□□□□ 0.89
CLCN4P51793 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN4P51793 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN4P51793 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCN4P51793 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLCN4P51793 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN4P51793 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLCN4P51793 AC117947.1-201ENST00000427448 529 ntBASIC20.63■□□□□ 0.89
CLCN4P51793 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCN4P51793 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCN4P51793 AC116562.4-202ENST00000641738 218 ntBASIC20.63■□□□□ 0.89
CLCN4P51793 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCN4P51793 TMEM179-206ENST00000616017 1645 ntBASIC20.63■□□□□ 0.89
CLCN4P51793 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN4P51793 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLCN4P51793 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCN4P51793 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCN4P51793 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN4P51793 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN4P51793 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCN4P51793 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN4P51793 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLCN4P51793 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCN4P51793 AL138966.2-201ENST00000621997 464 ntBASIC20.62■□□□□ 0.89
CLCN4P51793 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCN4P51793 SMG8-203ENST00000578922 2178 ntBASIC20.62■□□□□ 0.89
CLCN4P51793 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN4P51793 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN4P51793 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN4P51793 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 SLC25A1P2-201ENST00000430693 912 ntBASIC20.61■□□□□ 0.89
CLCN4P51793 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 CCR12P-201ENST00000446203 998 ntBASIC20.61■□□□□ 0.89
CLCN4P51793 AC091390.4-202ENST00000476426 537 ntBASIC20.61■□□□□ 0.89
CLCN4P51793 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.61■□□□□ 0.89
CLCN4P51793 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 LINC01238-205ENST00000567549 1107 ntBASIC20.61■□□□□ 0.89
CLCN4P51793 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
CLCN4P51793 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLCN4P51793 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLCN4P51793 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
CLCN4P51793 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCN4P51793 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN4P51793 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCN4P51793 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCN4P51793 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
CLCN4P51793 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLCN4P51793 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN4P51793 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCN4P51793 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCN4P51793 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.6■□□□□ 0.89
CLCN4P51793 Z85996.1-201ENST00000494644 937 ntBASIC20.6■□□□□ 0.89
CLCN4P51793 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.6■□□□□ 0.89
CLCN4P51793 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCN4P51793 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms