Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF144AP50876 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF144AP50876 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF144AP50876 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RNF144AP50876 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF144AP50876 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF144AP50876 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF144AP50876 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF144AP50876 AC087289.5-201ENST00000586076 3175 ntBASIC18.18■□□□□ 0.5
RNF144AP50876 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 AC018445.3-201ENST00000624177 1945 ntBASIC18.17■□□□□ 0.5
RNF144AP50876 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 TREX1-205ENST00000625293 1783 ntBASIC18.17■□□□□ 0.5
RNF144AP50876 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF144AP50876 AC060766.5-201ENST00000590539 871 ntBASIC18.17■□□□□ 0.5
RNF144AP50876 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 HLA-B-256ENST00000639848 1089 ntBASIC18.17■□□□□ 0.5
RNF144AP50876 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF144AP50876 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF144AP50876 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF144AP50876 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF144AP50876 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF144AP50876 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF144AP50876 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF144AP50876 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF144AP50876 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF144AP50876 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RNF144AP50876 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF144AP50876 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF144AP50876 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RNF144AP50876 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF144AP50876 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF144AP50876 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF144AP50876 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
RNF144AP50876 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF144AP50876 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF144AP50876 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.15■□□□□ 0.5
RNF144AP50876 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF144AP50876 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF144AP50876 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF144AP50876 AC009237.14-201ENST00000609975 1594 ntBASIC18.15■□□□□ 0.5
RNF144AP50876 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RNF144AP50876 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF144AP50876 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF144AP50876 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF144AP50876 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
RNF144AP50876 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF144AP50876 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF144AP50876 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF144AP50876 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF144AP50876 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF144AP50876 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms