Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CDK9P50750 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDK9P50750 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.82■□□□□ 0.6
CDK9P50750 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.82■□□□□ 0.6
CDK9P50750 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.82■□□□□ 0.6
CDK9P50750 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 AL589743.5-201ENST00000616611 1050 ntBASIC18.82■□□□□ 0.6
CDK9P50750 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDK9P50750 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.82■□□□□ 0.6
CDK9P50750 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDK9P50750 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDK9P50750 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 MKRN4P-201ENST00000444706 1521 ntBASIC18.81■□□□□ 0.6
CDK9P50750 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.81■□□□□ 0.6
CDK9P50750 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.81■□□□□ 0.6
CDK9P50750 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDK9P50750 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CDK9P50750 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.81■□□□□ 0.6
CDK9P50750 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CDK9P50750 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK9P50750 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK9P50750 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK9P50750 AL138781.1-201ENST00000566567 1274 ntBASIC18.8■□□□□ 0.6
CDK9P50750 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.8■□□□□ 0.6
CDK9P50750 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.8■□□□□ 0.6
CDK9P50750 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDK9P50750 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CDK9P50750 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CDK9P50750 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.79■□□□□ 0.6
CDK9P50750 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK9P50750 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK9P50750 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK9P50750 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDK9P50750 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.79■□□□□ 0.6
CDK9P50750 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CDK9P50750 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CDK9P50750 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 KRT8P17-201ENST00000453110 1448 ntBASIC18.78■□□□□ 0.6
CDK9P50750 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDK9P50750 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK9P50750 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK9P50750 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.78■□□□□ 0.6
CDK9P50750 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
CDK9P50750 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms