Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.34■□□□□ 0.37
SRP9P49458 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.34■□□□□ 0.37
SRP9P49458 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.34■□□□□ 0.37
SRP9P49458 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 CYP2T3P-201ENST00000601990 817 ntBASIC17.34■□□□□ 0.37
SRP9P49458 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SRP9P49458 TREX1-205ENST00000625293 1783 ntBASIC17.34■□□□□ 0.37
SRP9P49458 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SRP9P49458 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.34■□□□□ 0.37
SRP9P49458 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SRP9P49458 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 Z82202.1-201ENST00000623446 1880 ntBASIC17.33■□□□□ 0.37
SRP9P49458 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.33■□□□□ 0.37
SRP9P49458 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SRP9P49458 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.33■□□□□ 0.37
SRP9P49458 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.33■□□□□ 0.37
SRP9P49458 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SRP9P49458 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 KRT18P68-201ENST00000392293 1000 ntBASIC17.33■□□□□ 0.36
SRP9P49458 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 LSM12P1-201ENST00000411836 588 ntBASIC17.33■□□□□ 0.36
SRP9P49458 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.33■□□□□ 0.36
SRP9P49458 TSPY6P-201ENST00000448518 926 ntBASIC17.33■□□□□ 0.36
SRP9P49458 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SRP9P49458 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.33■□□□□ 0.36
SRP9P49458 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.33■□□□□ 0.36
SRP9P49458 AL589743.5-201ENST00000616611 1050 ntBASIC17.33■□□□□ 0.36
SRP9P49458 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SRP9P49458 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.33■□□□□ 0.36
SRP9P49458 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.33■□□□□ 0.36
SRP9P49458 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SRP9P49458 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SRP9P49458 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SRP9P49458 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRP9P49458 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SRP9P49458 TMEM179-206ENST00000616017 1645 ntBASIC17.32■□□□□ 0.36
SRP9P49458 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
SRP9P49458 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.32■□□□□ 0.36
SRP9P49458 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SRP9P49458 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SRP9P49458 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 ID1-201ENST00000376105 1233 ntBASIC17.32■□□□□ 0.36
SRP9P49458 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
SRP9P49458 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.32■□□□□ 0.36
SRP9P49458 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 MIR2861-201ENST00000636310 90 ntBASIC17.32■□□□□ 0.36
SRP9P49458 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRP9P49458 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRP9P49458 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRP9P49458 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 BX276092.2-201ENST00000417668 665 ntBASIC17.31■□□□□ 0.36
SRP9P49458 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.31■□□□□ 0.36
SRP9P49458 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.31■□□□□ 0.36
SRP9P49458 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SRP9P49458 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.31■□□□□ 0.36
SRP9P49458 AL356652.1-201ENST00000615962 565 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms